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Blogs about: Mibbi

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HL53: Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project (ISMB 2009)3 comments

themindwobbles wrote 4 months ago: Chris Taylor Standards are hugely dependent on their respective communities for reqs gathering, deve … more →

Tags: Standards, Meetings & Conferences, ismb 2009, Chris Taylor

Standards and infrastructure for managing experimental metadata (ISMB DAM SIG 2009)

themindwobbles wrote 4 months ago: Philippe Rocca-Serra, EBI Metagenomics and metatranscriptomics experiments are growing in size and c … more →

Tags: Meetings & Conferences, fuge, OBI, ISA-Tab, ismb 2009, OBO Foundry, dam sig 2009, philippe rocca-serra, bii

Rules or Checklist? Which would you prefer from the OBO Foundry?6 comments

themindwobbles wrote 5 months ago: [Update: Duncan's written a call for comments on the OBO Foundry criteria on his blog. Also posting … more →

Tags: Standards, Meetings & Conferences, Semantics and Ontologies, obo, OBO Foundry

Content, Syntax and Semantics1 comment

peanutbutter wrote 6 months ago: These are the slides I gave at a DCC workshop entitled, “Digital curation 101″ which aim … more →

Tags: bioinformatics, Computer Science, Conference, Business, Content, Data, data curation, digital curation, Digital Curation Centre

HUPO PSI-PAR: standard format for protein affinity reagents

peanutbutter wrote 7 months ago: Image via Wikipedia HUPO PSI-PAR: standard format for protein affinity reagents is now available for … more →

Tags: data standards, Antibody, Data Representation, Immune system, PSI, Standards

The Triumvirate of Scientific Data4 comments

peanutbutter wrote 1 year ago: In a recent Nature editorial entitled Standardizing data,  several projects were highlighted that ar … more →

Tags: bioinformatics, data standards, ontology, open data, OBO Foundry, Dublin Core, resource description framework, xml, Semantic Web

MIAPE: Gel Informatics is now available for Public Comment

peanutbutter wrote 1 year ago: PSI logo The MIAPE: Gel Informatics module formalised by the Proteomics Standards Initiative (PSI) n … more →

Tags: bioinformatics, data standards, Journals Publishing, Proteomics, PSI, reporting guidelines

Double standards in Nature biotechnology

peanutbutter wrote 1 year ago: OK, So that is a relatively inflammatory and controversial headline, edging on the side of tabloid s … more →

Tags: Journals Publishing, bioinformatics, data standards, Open Biomedical Ontologies, Centre for Ecology and Hydrology, European Bioinformatics Institute, united kingdom, UK, OBO Foundry

You Know OBO? Let's GO!

Duncan wrote 1 year ago: According to their website “The Open Biomedical Ontologies (OBO) Foundry is a collaborative ex … more →

Tags: informatics, EBI, sbo, ChEBI, ontology, obo, gene ontology, Go, Biomedical

The First MIBBI workshop: Day 2

peanutbutter wrote 1 year ago: The second day of the MIBBI workshop was more “free flowing” compared to the first day. … more →

Tags: conference report, data standards, Conference, mibbi standards reporting guidelines conference

The First MIBBI Workshop: Day 13 comments

peanutbutter wrote 1 year ago: MIBBI is a registry of scientific experiment reporting guidelines with the idea to foster a foundry … more →

Tags: bioinformatics, ontology, Carmen, neuroinformatics, conference report, open data, data standards, Open Science, Conference

GSC helping to plan the first MIBBI workshop in April 2008 with funding from the UK's BBSRC

tgra wrote 1 year ago: The GSC is helping to plan the first workshop for the Minimum Information for Biological and Biomedi … more →

Tags: GSC, genomic standards consortium, xml schema, EBI, data standard, data standards

Do scientists really believe in open science?10 comments

peanutbutter wrote 2 years ago: I am writing this post as a collection of the current status and opinions of “Open Science … more →

Tags: Journals Publishing, bioinformatics, ontology, Social Media, Carmen, neuroinformatics, open data, data standards, Open Science


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