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All Things Work Together

When the storms of life come it is comforting to know “all things,” no matter what, “work together for good” (Romans 8:28). It was the Apostle Paul who penned those words under the inspiration of the Holy Spirit; the Paul who had five times received forty stripes save one, was beaten with rods, stoned and left for dead, three times suffered shipwreck, being in the deep a night and a day. 306 more words

Biblical Truth

April Showers!

April showers bring May flowers, so have your rain gear ready! Is your trench coat ready to wear? Are your umbrellas in good working order? Do you have options like rain boots and hats? 35 more words

STYLE

How to compile and install wndchrm / WND-CHARM using bash script in Ubuntu 14.04 LTS 64-bit

# hardware requirements: see https://github.com/wnd-charm/wnd-charm
# Wndchrm - an open source utility for biological image analysis
# WND-CHARM is an acronym that stands for "Weighted Neighbor Distance using Compound Hierarchy of Algorithms Representing Morphology."
cd
rm -rf wnd-charm
# install prerequisites:
sudo apt-get update
sudo apt-get install build-essential libtiff4-dev libfftw3-dev libX11-dev libxt-dev libxaw7-dev phylip
sudo apt-get install python-networkx python-skimage python-sklearn checkinstall
sudo apt-get install python-matplotlib python-numpy python-pandas
sudo apt-get install python-jsonschema openbox ipython python-scipy
sudo apt-get install spyder unp python-pip build-essential python-dev swig
sudo pip install --upgrade beautifulsoup4 numpy scipy matplotlib argparse
sudo pip install --upgrade ipython mistune networkx pandas py4j runipy
sudo pip install --upgrade scikit-image scikit-learn scipy-data_fitting
sudo pip install --upgrade statsmodels jsonschema
# install wnd-charm
git clone https://github.com/wnd-charm/wnd-charm.git
cd wnd-charm
sudo ./configure
sudo make
sudo make check
# change version from 'charm' to 1 when running sudo checkinstall to avoid errors! 103 more words
Ubuntu